General Information:
Id: | 14,021 |
Diseases: |
Alzheimer disease
- [OMIM]
Metabolic |
Rattus norvegicus | |
female | |
90 young or middle-aged female Sprague-Dawley rats, a rat model recapitulating fundamental characteristics of the human perimenopause | |
article/cited | |
Reference: | Yin F et al.(2015) The perimenopausal aging transition in the female rat brain: decline in bioenergetic systems and synaptic plasticity Neurobiol Aging 36: 2282-2295 [PMID: 25921624] |
Interaction Information:
Comment | The perimenopause is an aging transition unique to the female that leads to reproductive senescence which can be characterized by multiple neurological symptoms. (cited information) |
Formal Description Interaction-ID: 132448 |
|
Comment | Gene expression analyses indicated two distinct aging programs: chronological and endocrine. |
Formal Description Interaction-ID: 132467 |
|
Comment | Gene expression analyses indicated two distinct aging programs: chronological and endocrine. |
Formal Description Interaction-ID: 132468 |
|
Comment | The endocrine transition state manifested by irregular cycling thus emerged as a critical period for bioenergetic function. |
Formal Description Interaction-ID: 132469 |
process endocrine transition to perimenopause increases_activity of phenotype irregular cycling |
Comment | Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information) |
Formal Description Interaction-ID: 132505 |
process menopause transition increases_activity of phenotype decreased ovarian follicle number |
Comment | In humans and rodents, ovarian senescence from follicular depletion is associated with decreasing fecundity and increasing irregularity of estrus cycles. |
Formal Description Interaction-ID: 132506 |
process ovarian senescence increases_activity of phenotype |
Comment | The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers. |
Formal Description Interaction-ID: 132507 |
process menopause transition decreases_expression of gene/protein |
Comment | It was also shown that the decline in brain glucose uptake is associated with a decrease in neuronal glucose transporter GLUT3 as reported in a previous study on female brain aging. (cited information) |
Formal Description Interaction-ID: 132508 |
phenotype decreased SLC2A3 expression increases_activity of phenotype |
Comment | The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months. |
Formal Description Interaction-ID: 132509 |
|
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132510 |
process menopause transition decreases_expression of gene/protein |
Comment | Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information) |
Formal Description Interaction-ID: 132511 |
process menopause transition increases_activity of phenotype irregular cycling |
Comment | Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information) |
Formal Description Interaction-ID: 132512 |
|
Comment | Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information) |
Formal Description Interaction-ID: 132513 |
process menopause transition increases_activity of phenotype irregular steroid hormone fluctuation |
Comment | Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information) |
Formal Description Interaction-ID: 132514 |
process menopause transition increases_activity of phenotype insensitivity to estrogen |
Comment | In humans and rodents, ovarian senescence from follicular depletion is associated with decreasing fecundity and increasing irregularity of estrus cycles. |
Formal Description Interaction-ID: 132515 |
process ovarian senescence increases_activity of phenotype |
Comment | The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro. |
Formal Description Interaction-ID: 132516 |
process transition to irregular cycles cooccurs with phenotype cognitive impairment |
Comment | An increase in body weight was observed between the 6 month- and the 9‚Äď10 month-old regular cyclers and was constant for all subsequent stages. |
Formal Description Interaction-ID: 132517 |
process increases_activity of phenotype |
Comment | The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers. |
Formal Description Interaction-ID: 132518 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PDHA1 |
Comment | The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers. |
Formal Description Interaction-ID: 132519 |
process menopause transition decreases_expression of gene/protein |
Comment | The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months. |
Formal Description Interaction-ID: 132523 |
|
Drugbank entries | Show/Hide entries for CPT2 |
Comment | The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months. |
Formal Description Interaction-ID: 132524 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for CPT2 |
Comment | The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months. |
Formal Description Interaction-ID: 132525 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for ESRRA |
Comment | The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months. |
Formal Description Interaction-ID: 132526 |
process menopause transition NOT affects_expression of gene/protein genes involved in glycolysis |
Comment | The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro. |
Formal Description Interaction-ID: 132527 |
process transition to irregular cycles cooccurs with phenotype cognitive impairment |
Comment | The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro. |
Formal Description Interaction-ID: 132528 |
process transition to irregular cycles cooccurs with phenotype altered sex steroids |
Comment | The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro. |
Formal Description Interaction-ID: 132529 |
process transition to irregular cycles cooccurs with phenotype altered ESR1 expression |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132530 |
process menopause transition decreases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132531 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132532 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for GLRX2 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132533 |
process menopause transition decreases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132534 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for GAD1 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132535 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for GAD2 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132536 |
|
Drugbank entries | Show/Hide entries for GAD1 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132537 |
|
Drugbank entries | Show/Hide entries for GAD2 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4). |
Formal Description Interaction-ID: 132538 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for CXCR4 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132578 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for HADH |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132579 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132580 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PLCD1 |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132581 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132582 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132583 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for C4A |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132584 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132585 |
process menopause transition increases_expression of gene/protein |
Comment | The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)). |
Formal Description Interaction-ID: 132586 |
process menopause transition increases_expression of gene/protein |
Comment | The pattern of serum and cortical levels of E2 across all groups differed inasmuch as serum E2 was not correlated with cortex E2 at the same endocrine stage. While serum E2 levels were highest in the 9‚Äď10 month regular and irregular cyclers and declined thereafter, the most robust E2 change was a collapse in cortex levels from 6 month to 9‚Äď10 month rats with negligible brain E2 observed in acyclic rats. |
Formal Description Interaction-ID: 132622 |
process menopause transition increases_quantity of drug/chemical compound |
Drugbank entries | Show/Hide entries for |
Comment | In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age. |
Formal Description Interaction-ID: 132623 |
process menopause transition increases_quantity of drug/chemical compound |
Drugbank entries | Show/Hide entries for |
Comment | ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age. |
Formal Description Interaction-ID: 132624 |
|
Drugbank entries | Show/Hide entries for ESR1 |
Comment | Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group. |
Formal Description Interaction-ID: 132625 |
process menopause transition increases_expression of gene/protein |
Comment | Estrogen protects the brain against AD in part by reducing beta-amyloid production and enhancing its clearance, protecting against apoptosis, supporting neuronal function and signaling. (cited information) |
Formal Description Interaction-ID: 132626 |
drug/chemical compound Estrogen decreases_activity of disease |
Comment | The pattern of serum and cortical levels of E2 across all groups differed inasmuch as serum E2 was not correlated with cortex E2 at the same endocrine stage. While serum E2 levels were highest in the 9‚Äď10 month regular and irregular cyclers and declined thereafter, the most robust E2 change was a collapse in cortex levels from 6 month to 9‚Äď10 month rats with negligible brain E2 observed in acyclic rats. |
Formal Description Interaction-ID: 132627 |
process menopause transition decreases_quantity of drug/chemical compound |
Drugbank entries | Show/Hide entries for |
Comment | In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age. |
Formal Description Interaction-ID: 132628 |
process menopause transition decreases_quantity of drug/chemical compound |
Drugbank entries | Show/Hide entries for |
Comment | ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age. |
Formal Description Interaction-ID: 132629 |
|
Drugbank entries | Show/Hide entries for ESR1 |
Comment | ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age. |
Formal Description Interaction-ID: 132630 |
|
Drugbank entries | Show/Hide entries for ESR1 |
Comment | ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age. |
Formal Description Interaction-ID: 132631 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for ESR2 |
Comment | ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age. |
Formal Description Interaction-ID: 132632 |
phenotype acyclicity increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for ESR2 |
Comment | In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age. |
Formal Description Interaction-ID: 132633 |
phenotype acyclicity decreases_quantity of drug/chemical compound |
Drugbank entries | Show/Hide entries for |
Comment | Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group. |
Formal Description Interaction-ID: 132634 |
process menopause transition increases_expression of gene/protein |
Comment | Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group. |
Formal Description Interaction-ID: 132635 |
process menopause transition NOT affects_expression of gene/protein |
Comment | Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group. |
Formal Description Interaction-ID: 132636 |
process menopause transition increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PGR |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132639 |
phenotype irregular cycling decreases_expression of gene/protein |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132640 |
phenotype irregular cycling decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for ESRRA |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132641 |
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Drugbank entries | Show/Hide entries for NFKB2 |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132642 |
phenotype irregular cycling decreases_expression of gene/protein |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132643 |
phenotype irregular cycling decreases_expression of gene/protein |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132644 |
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Drugbank entries | Show/Hide entries for MAPK3 |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132645 |
phenotype irregular cycling decreases_expression of gene/protein |
Comment | Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)). |
Formal Description Interaction-ID: 132646 |
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Drugbank entries | Show/Hide entries for MAP2 |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132647 |
phenotype acyclicity increases_expression of gene/protein CPT2 |
Drugbank entries | Show/Hide entries for CPT2 |
Comment | The expression of APP-Binding, Family B, Member 1 (Apbb1), decreased in acyclic animals. |
Formal Description Interaction-ID: 132648 |
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Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132649 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in glucose transport |
Comment | Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered. |
Formal Description Interaction-ID: 132650 |
phenotype acyclicity decreases_expression of gene/protein genes involved in glycolysis |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132651 |
phenotype acyclicity increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PLA2G2A |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132652 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132653 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132654 |
phenotype acyclicity increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for CXCL12 |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132655 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132656 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132657 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132658 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132659 |
phenotype acyclicity increases_expression of gene/protein |
Comment | Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1). |
Formal Description Interaction-ID: 132660 |
phenotype acyclicity increases_expression of gene/protein |
Drugbank entries | Show/Hide entries for BCL2L1 |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132661 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in glycolysis |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132662 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in mitochondrial function |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132663 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in cellular redox homeostasis |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132664 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in inflammation |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132665 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in Abeta clearance and degradation |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132666 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in apoptosis |
Comment | Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity. |
Formal Description Interaction-ID: 132667 |
phenotype irregular cycling decreases_expression of gene/protein genes involved in synaptic plasticity |
Comment | Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered. |
Formal Description Interaction-ID: 132668 |
phenotype acyclicity increases_expression of gene/protein genes involved in mitochondrial function |
Comment | Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered. |
Formal Description Interaction-ID: 132669 |
phenotype acyclicity increases_expression of gene/protein genes involved in synaptic plasticity |
Comment | In Reg-9‚Äď10m vs Reg-6m the phospholipase PLD1 is upregulated. |
Formal Description Interaction-ID: 133264 |
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Drugbank entries | Show/Hide entries for PLD1 |
Comment | In Reg-9‚Äď10m vs Reg-6m HRH1 is upregulated. |
Formal Description Interaction-ID: 133272 |
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Drugbank entries | Show/Hide entries for HRH1 |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene BCL2L1 involved in apoptosis. |
Formal Description Interaction-ID: 133611 |
phenotype acyclicity decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for BCL2L1 |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene BCL2L1 involved in apoptosis. |
Formal Description Interaction-ID: 133612 |
gene/protein affects_activity of process |
Drugbank entries | Show/Hide entries for BCL2L1 |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism. |
Formal Description Interaction-ID: 133926 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PPARG |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism. |
Formal Description Interaction-ID: 133927 |
gene/protein affects_activity of process |
Drugbank entries | Show/Hide entries for PPARG |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism. |
Formal Description Interaction-ID: 133985 |
gene/protein affects_activity of process |
Drugbank entries | Show/Hide entries for PLA2G1B |
Comment | Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism. |
Formal Description Interaction-ID: 133986 |
process menopause transition decreases_expression of gene/protein |
Drugbank entries | Show/Hide entries for PLA2G1B |
Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB. |
Formal Description Interaction-ID: 134762 |
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Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB. |
Formal Description Interaction-ID: 134763 |
phenotype irregular cycling decreases_activity of process Insulin/IGF1 signaling pathway |
Comment | Impaired insulin/IGF1 signaling during brain aging was shown in AD animal models and patients. |
Formal Description Interaction-ID: 134764 |
process increases_activity of phenotype impaired insulin/IGF1 signaling pathway |
Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats. |
Formal Description Interaction-ID: 135324 |
phenotype irregular cycling decreases_quantity of protein modification MAPK3-phos |
Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats. |
Formal Description Interaction-ID: 135325 |
phenotype irregular cycling decreases_quantity of protein modification MAPK1-phos |
Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats. |
Formal Description Interaction-ID: 135326 |
process decreases_quantity of protein modification MAPK3-phos |
Comment | The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats. |
Formal Description Interaction-ID: 135327 |
process decreases_quantity of protein modification MAPK1-phos |