General Information:

Id: 14,021
Diseases: Alzheimer disease - [OMIM]
Metabolic
Rattus norvegicus
female
90 young or middle-aged female Sprague-Dawley rats, a rat model recapitulating fundamental characteristics of the human perimenopause
article/cited
Reference: Yin F et al.(2015) The perimenopausal aging transition in the female rat brain: decline in bioenergetic systems and synaptic plasticity Neurobiol Aging 36: 2282-2295 [PMID: 25921624]

Interaction Information:

Comment The perimenopause is an aging transition unique to the female that leads to reproductive senescence which can be characterized by multiple neurological symptoms. (cited information)
Formal Description
Interaction-ID: 132448

process

menopause transition

increases_activity of

Comment Gene expression analyses indicated two distinct aging programs: chronological and endocrine.
Formal Description
Interaction-ID: 132467

process

chronological aging

affects_activity of

process

gene expression

Comment Gene expression analyses indicated two distinct aging programs: chronological and endocrine.
Formal Description
Interaction-ID: 132468

process

endocrine aging

affects_activity of

process

gene expression

Comment The endocrine transition state manifested by irregular cycling thus emerged as a critical period for bioenergetic function.
Formal Description
Interaction-ID: 132469

process

endocrine transition to perimenopause

increases_activity of

phenotype

irregular cycling

Comment Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information)
Formal Description
Interaction-ID: 132505

process

menopause transition

increases_activity of

phenotype

decreased ovarian follicle number

Comment In humans and rodents, ovarian senescence from follicular depletion is associated with decreasing fecundity and increasing irregularity of estrus cycles.
Formal Description
Interaction-ID: 132506

process

ovarian senescence

increases_activity of

phenotype

reduced fertility

in humans and rodents; ovarian senescence from follicular depletion
Comment The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers.
Formal Description
Interaction-ID: 132507

process

menopause transition

decreases_expression of

gene/protein

SLC2A3

in the hippocampus of 9-10 m irregular cyclers; compared to 9‚Äď10 month regular cyclers
Comment It was also shown that the decline in brain glucose uptake is associated with a decrease in neuronal glucose transporter GLUT3 as reported in a previous study on female brain aging. (cited information)
Formal Description
Interaction-ID: 132508

phenotype

decreased SLC2A3 expression

increases_activity of

in female brain
Comment The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months.
Formal Description
Interaction-ID: 132509

drug/chemical compound

Estrogen

affects_activity of

Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132510

process

menopause transition

decreases_expression of

gene/protein

HSPD1

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Comment Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information)
Formal Description
Interaction-ID: 132511

process

menopause transition

increases_activity of

phenotype

irregular cycling

Comment Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information)
Formal Description
Interaction-ID: 132512

process

menopause transition

increases_activity of

Comment Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information)
Formal Description
Interaction-ID: 132513

process

menopause transition

increases_activity of

phenotype

irregular steroid hormone fluctuation

Comment Similar to the human, rodent and nonhuman primates share common features of the perimenopausal transition, including decline in follicles, irregular cycling, irregular fertility, steroid hormone fluctuations and insensitivity to estrogen. (cited information)
Formal Description
Interaction-ID: 132514

process

menopause transition

increases_activity of

phenotype

insensitivity to estrogen

Comment In humans and rodents, ovarian senescence from follicular depletion is associated with decreasing fecundity and increasing irregularity of estrus cycles.
Formal Description
Interaction-ID: 132515

process

ovarian senescence

increases_activity of

in humans and rodents
Comment The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro.
Formal Description
Interaction-ID: 132516

process

transition to irregular cycles

cooccurs with

phenotype

cognitive impairment

Comment An increase in body weight was observed between the 6 month- and the 9‚Äď10 month-old regular cyclers and was constant for all subsequent stages.
Formal Description
Interaction-ID: 132517

process

aging

increases_activity of

between the 6 month- and the 9‚Äď10 month-old regular cyclers
Comment The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers.
Formal Description
Interaction-ID: 132518

process

menopause transition

decreases_expression of

gene/protein

PDHA1

in the hippocampus of 9-10 m irregular cyclers; compared to 9-10 m regular cyclers
Drugbank entries Show/Hide entries for PDHA1
Comment The expression of glucose transporter 3 (GLUT3), pyruvate dehydrogenase E1alpha subunit (PDH-E1alpha), and ATPAF2 were decreased in the hippocampus of 9-10 m irregular cyclers.
Formal Description
Interaction-ID: 132519

process

menopause transition

decreases_expression of

gene/protein

ATPAF2

in the hippocampus of 9-10 m irregular cyclers; compared to 9-10 m regular cyclers
Comment The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months.
Formal Description
Interaction-ID: 132523

gene/protein

CPT2

affects_activity of

Drugbank entries Show/Hide entries for CPT2
Comment The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months.
Formal Description
Interaction-ID: 132524

process

menopause transition

increases_expression of

gene/protein

CPT2

when the rats transitioned from irregular cycling to acyclic
Drugbank entries Show/Hide entries for CPT2
Comment The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months.
Formal Description
Interaction-ID: 132525

process

menopause transition

increases_expression of

gene/protein

ESRRA

when the rats transitioned from irregular cycling to acyclic
Drugbank entries Show/Hide entries for ESRRA
Comment The estrogen-controlled glucose metabolism appears to be replaced by ketone body metabolism when the rats transitioned from irregular cycling to acyclic, as suggested by increased expression of fatty acid metabolism-related gene (Cpt2) and mitochondria-related genes (Atpaf2 and Esrra) but unaltered glycolytic genes. This could represent an adaptive response of the midlife brain to enhance fatty acid metabolism and to utilize ketone bodies as alternative substrates due to declined glucose metabolism; the adaptive response was transient and lost with further chronological aging to 16 months.
Formal Description
Interaction-ID: 132526

process

menopause transition

NOT affects_expression of

gene/protein

genes involved in glycolysis

when the rats transitioned from irregular cycling to acyclic, transient response, lost with further chronological aging to 16 months
Comment The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro.
Formal Description
Interaction-ID: 132527

process

transition to irregular cycles

cooccurs with

phenotype

cognitive impairment

Comment The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro.
Formal Description
Interaction-ID: 132528

process

transition to irregular cycles

cooccurs with

phenotype

altered sex steroids

in hippocampus and cerebral cortex
Comment The transition to irregular cycles was associated with cognitive impairments and altered sex steroids in hippocampus and cerebral cortex, while altered expression of estrogen receptor alpha (ERalpha) were found in astrocytes of cerebral cortex with altered neurotrophic activity in vitro.
Formal Description
Interaction-ID: 132529

process

transition to irregular cycles

cooccurs with

phenotype

altered ESR1 expression

in astrocytes of cerebral cortex; with altered neurotrophic activity in vitro
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132530

process

menopause transition

decreases_expression of

gene/protein

BNIP1

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132531

process

menopause transition

increases_expression of

gene/protein

NFE2L2

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in redox-sensitive transcription
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132532

process

menopause transition

decreases_expression of

gene/protein

GLRX2

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Drugbank entries Show/Hide entries for GLRX2
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132533

process

menopause transition

decreases_expression of

gene/protein

PRDX3

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132534

process

menopause transition

decreases_expression of

gene/protein

GAD1

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Drugbank entries Show/Hide entries for GAD1
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132535

process

menopause transition

decreases_expression of

gene/protein

GAD2

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Drugbank entries Show/Hide entries for GAD2
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132536

gene/protein

GAD1

increases_quantity of

drug/chemical compound

GABA

Drugbank entries Show/Hide entries for GAD1
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132537

gene/protein

GAD2

increases_quantity of

drug/chemical compound

GABA

Drugbank entries Show/Hide entries for GAD2
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant decline in the expression of genes involved in molecule transport (heat shock 60 kDa protein 1 (HSPD1) and Bcl2/adenovirus E1B interacting protein 1 (Bnip1)); mitochondrial redox enzymes glutaredoxin 2 (Glrx2) and peroxiredoxin 3 (Prx3); the glutamate decarboxylases (Gad1 and Gad2, which generate the neurotransmitter GABA), and a neuronal survival gene (chemokine receptor Cxrcr4).
Formal Description
Interaction-ID: 132538

process

menopause transition

decreases_expression of

gene/protein

CXCR4

in 9‚Äď10 month regular cyclers; a neuronal survival gene, compared to 6-month cyclers
Drugbank entries Show/Hide entries for CXCR4
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132578

process

menopause transition

increases_expression of

gene/protein

HADH

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in lipid metabolism
Drugbank entries Show/Hide entries for HADH
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132579

process

menopause transition

increases_expression of

gene/protein

PLCG2

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in lipid metabolism
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132580

process

menopause transition

increases_expression of

gene/protein

PLCD1

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in lipid metabolism
Drugbank entries Show/Hide entries for PLCD1
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132581

process

menopause transition

increases_expression of

gene/protein

APOA1

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132582

process

menopause transition

increases_expression of

gene/protein

ABCA7

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132583

process

menopause transition

increases_expression of

gene/protein

C4A

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in inflammation
Drugbank entries Show/Hide entries for C4A
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132584

process

menopause transition

increases_expression of

gene/protein

APEH

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in amyloid processing
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132585

process

menopause transition

increases_expression of

gene/protein

CASP8

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in apoptosis
Comment The 9‚Äď10 month regular cyclers (compared to 6-month cyclers) showed a significant increase in genes involved in redox-sensitive transcription (nuclear factor erythroid 2-like 2, Nfe2l2), lipid metabolism (hydroxyacyl-CoA dehydrogenase (Hadh), phospholipases C gamma 2 (Plcg2) and D1 (Plcd1)), cholesterol homeostasis and trafficking (apolipoprotein A1 (Apoa1) and ATP-binding cassette sub-family A member7 (Abca7)), inflammation (complement component 4A (C4a)), amyloid processing (N-acylaminoacyl-peptide hydrolase (Apeh)), and apoptosis (caspase 8 (Casp8) and clusterin (Clu)).
Formal Description
Interaction-ID: 132586

process

menopause transition

increases_expression of

gene/protein

CLU

in 9‚Äď10 month regular cyclers; compared to 6-month cyclers, involved in apoptosis
Comment The pattern of serum and cortical levels of E2 across all groups differed inasmuch as serum E2 was not correlated with cortex E2 at the same endocrine stage. While serum E2 levels were highest in the 9‚Äď10 month regular and irregular cyclers and declined thereafter, the most robust E2 change was a collapse in cortex levels from 6 month to 9‚Äď10 month rats with negligible brain E2 observed in acyclic rats.
Formal Description
Interaction-ID: 132622

process

menopause transition

increases_quantity of

drug/chemical compound

Estradiol

in serum of the 9‚Äď10 month regular and irregular cyclers ; serum E2 was not correlated with cortex E2 at the same endocrine stage
Drugbank entries Show/Hide entries for
Comment In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age.
Formal Description
Interaction-ID: 132623

process

menopause transition

increases_quantity of

drug/chemical compound

Progesterone

in serum of the 9‚Äď10 month irregular cyclers; serum P4 levels were correlated with cortical levels
Drugbank entries Show/Hide entries for
Comment ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age.
Formal Description
Interaction-ID: 132624

process

aging

NOT affects_expression of

gene/protein

ESR1

Drugbank entries Show/Hide entries for ESR1
Comment Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group.
Formal Description
Interaction-ID: 132625

process

menopause transition

increases_expression of

gene/protein

PGR (isoform A)

in 9‚Äď10 month irregular cyclers; compared to 6 month regular cyclers
Comment Estrogen protects the brain against AD in part by reducing beta-amyloid production and enhancing its clearance, protecting against apoptosis, supporting neuronal function and signaling. (cited information)
Formal Description
Interaction-ID: 132626

drug/chemical compound

Estrogen

decreases_activity of

in AD brain; by reducing beta-amyloid production and enhancing its clearance, protecting against apoptosis, supporting neuronal function and signaling
Comment The pattern of serum and cortical levels of E2 across all groups differed inasmuch as serum E2 was not correlated with cortex E2 at the same endocrine stage. While serum E2 levels were highest in the 9‚Äď10 month regular and irregular cyclers and declined thereafter, the most robust E2 change was a collapse in cortex levels from 6 month to 9‚Äď10 month rats with negligible brain E2 observed in acyclic rats.
Formal Description
Interaction-ID: 132627

process

menopause transition

decreases_quantity of

drug/chemical compound

Estradiol

in cortex of 6 month to 9‚Äď10 month rats; serum E2 was not correlated with cortex E2 at the same endocrine stage
Drugbank entries Show/Hide entries for
Comment In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age.
Formal Description
Interaction-ID: 132628

process

menopause transition

decreases_quantity of

drug/chemical compound

Progesterone

in serum of the transition into 9‚Äď10 month acyclic and in the cortex from 6 month regular to 9‚Äď10 month regular and irregular cyclers; serum P4 levels were correlated with cortical levels, remaining low in the 16 month acyclic group
Drugbank entries Show/Hide entries for
Comment ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age.
Formal Description
Interaction-ID: 132629

process

chronological aging

NOT affects_expression of

gene/protein

ESR1

Drugbank entries Show/Hide entries for ESR1
Comment ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age.
Formal Description
Interaction-ID: 132630

process

endocrine aging

NOT affects_expression of

gene/protein

ESR1

Drugbank entries Show/Hide entries for ESR1
Comment ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age.
Formal Description
Interaction-ID: 132631

process

menopause transition

decreases_expression of

gene/protein

ESR2

in the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for ESR2
Comment ERalpha expression was unaffected by either chronological or endocrine aging. Conversely, ERbeta expression declined in the 9‚Äď10 month irregular cyclers and rebounded with the onset of acyclicity at the same age.
Formal Description
Interaction-ID: 132632

phenotype

acyclicity

increases_expression of

gene/protein

ESR2

in the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for ESR2
Comment In contrast to E2, serum P4 levels were correlated with cortical levels. In serum, P4 level was greatest in the 9‚Äď10 month irregular cyclers and declined significantly with the transition into 9‚Äď10 month acyclic, and remained low in the 16 month acyclic group. In cortex, there was a trend towards decreased P4 level from 6 month regular to 9‚Äď10 month regular and irregular cyclers, which was statistically significant when animals transitioned into acyclicity at the same age.
Formal Description
Interaction-ID: 132633

phenotype

acyclicity

decreases_quantity of

drug/chemical compound

Progesterone

in the cortex of female rats transitioned into acyclicity
Drugbank entries Show/Hide entries for
Comment Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group.
Formal Description
Interaction-ID: 132634

process

menopause transition

increases_expression of

gene/protein

PGR (isoform B)

in 9‚Äď10 month irregular cyclers; compared to 6 month regular cyclers
Comment Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group.
Formal Description
Interaction-ID: 132635

process

menopause transition

NOT affects_expression of

gene/protein

PGRMC1

in all compared groups of the Perimenopause Animal Model (PAM)
Comment Compared to 6 month regular cyclers, the 9‚Äď10 month irregular cyclers had an increased expression of both PR-A and PR-B. The major difference in PR-A expression was between the 6 month- and 9‚Äď10 month regular cyclers whereas that in PR-B expression was between the 9 month regular- and irregular cyclers. The expression of PGRMC1 did not change across group.
Formal Description
Interaction-ID: 132636

process

menopause transition

increases_expression of

gene/protein

PGR

in 9‚Äď10 month irregular cyclers; compared to 6 month regular cyclers, concerning both isoforms A and B
Drugbank entries Show/Hide entries for PGR
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132639

phenotype

irregular cycling

decreases_expression of

gene/protein

ATPAF2

gene involved in bioenergetics, compared to regular cyclers
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132640

phenotype

irregular cycling

decreases_expression of

gene/protein

ESRRA

regulator of mitochondrial biogenesis, compared to regular cyclers
Drugbank entries Show/Hide entries for ESRRA
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132641

phenotype

irregular cycling

decreases_expression of

gene/protein

NFKB2

compared to regular cyclers
Drugbank entries Show/Hide entries for NFKB2
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132642

phenotype

irregular cycling

decreases_expression of

gene/protein

PLCB3

gene involved in lipid metabolism, compared to regular cyclers
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132643

phenotype

irregular cycling

decreases_expression of

gene/protein

IL1RL1

gene involved in inflammation, compared to regular cyclers
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132644

phenotype

irregular cycling

decreases_expression of

gene/protein

MAPK3

compared to regular cyclers
Drugbank entries Show/Hide entries for MAPK3
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132645

phenotype

irregular cycling

decreases_expression of

gene/protein

THOP1

gene involved in amyloid processing, compared to regular cyclers
Comment Comparisons among 9‚Äď10 month regular cyclers, irregular cyclers, and acyclic animals represent the impact of endocrine status independent of chronological age. Compared to regular cyclers, the irregular cyclers exhibited a significant decline in the expression of genes involved in bioenergetics (ATP synthase F1 complex assembly factor 2 (Atpaf2) and estrogen-related receptor alpha (Esrra, a regulator of mitochondrial biogenesis)), lipid metabolism (phospholipase C, beta 3 (Plcb3)), inflammation (interleukin 1 receptor-like 1 (Il1rl1), the downstream Mapk3 (Erk1) and nuclear factor of kappa light polypeptide gene enhancer in B-Cells 2 (Nfkb2)), and amyloid processing (thimet oligopeptidase (Thop1) and microtubule-associated protein 2 (Map2)).
Formal Description
Interaction-ID: 132646

phenotype

irregular cycling

decreases_expression of

gene/protein

MAP2

compared to regular cyclers
Drugbank entries Show/Hide entries for MAP2
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132647

phenotype

acyclicity

increases_expression of

gene/protein

CPT2

gene involved in fatty acid uptake by the mitochondria, compared to the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for CPT2
Comment The expression of APP-Binding, Family B, Member 1 (Apbb1), decreased in acyclic animals.
Formal Description
Interaction-ID: 132648

phenotype

acyclicity

decreases_expression of

gene/protein

APBB1

Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132649

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in glucose transport

compared to regular cyclers
Comment Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered.
Formal Description
Interaction-ID: 132650

phenotype

acyclicity

decreases_expression of

gene/protein

genes involved in glycolysis

compared 9‚Äď10 month irregular cyclers, deficits in glycolytic genes persisted into the acyclic condition
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132651

phenotype

acyclicity

increases_expression of

gene/protein

PLA2G2A

gene involved in fatty acid uptake by the mitochondria, compared to the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for PLA2G2A
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132652

phenotype

acyclicity

increases_expression of

gene/protein

ATPAF2

gene involved in mitochondrial biogenesis and ATP generation, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132653

phenotype

acyclicity

increases_expression of

gene/protein

ESRRB

gene involved in mitochondrial biogenesis and ATP generation, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132654

phenotype

acyclicity

increases_expression of

gene/protein

CXCL12

gene involved in inflammation, compared to the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for CXCL12
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132655

phenotype

acyclicity

increases_expression of

gene/protein

CD40

gene involved in inflammation, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132656

phenotype

acyclicity

increases_expression of

gene/protein

TNFAIP2

gene involved in inflammation, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132657

phenotype

acyclicity

increases_expression of

gene/protein

APOA1

gene involved in cholesterol homeostasis, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132658

phenotype

acyclicity

increases_expression of

gene/protein

STAR

gene involved in cholesterol homeostasis, compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132659

phenotype

acyclicity

increases_expression of

gene/protein

APBA3

compared to the 9‚Äď10 month irregular cyclers
Comment Compared to the 9‚Äď10 month irregular cyclers, the acyclic animals exhibited higher expression of genes involved in fatty acid uptake by the mitochondria (carnitine palmitoyltransferase 2 (Cpt2) and phospholipase A2 group 2A (Pla2g2a)), mitochondrial biogenesis and ATP generation (Atpaf2 and estrogen-related receptor beta (Esrrb)), inflammation (C-X-C motif chemokine 12 (Cxcl12), Cd40, TNF-alpha-induced protein 2 (Tnfaip2)), cholesterol homeostasis (Apoa1 and steroidogenic acute regulatory (Star)), and amyloid and apoptosis related (Apba3 and Bcl2l1).
Formal Description
Interaction-ID: 132660

phenotype

acyclicity

increases_expression of

gene/protein

BCL2L1

compared to the 9‚Äď10 month irregular cyclers
Drugbank entries Show/Hide entries for BCL2L1
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132661

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in glycolysis

compared to regular cyclers
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132662

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in mitochondrial function

compared to regular cyclers, TCA cycle, concerning electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132663

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in cellular redox homeostasis

compared to regular cyclers
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132664

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in inflammation

compared to regular cyclers, concerning adhesion, chemokines, interleukins, phospholipases
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132665

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in Abeta clearance and degradation

compared to regular cyclers
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132666

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in apoptosis

compared to regular cyclers
Comment Functional group analyses revealed a decline in irregular cyclers relative to regular cyclers in genes involved in glucose transport, glycolysis, mitochondrial energy-transducing systems (TCA cycle, electron transfer chain, oxidative phosphorylation, mitochondrial biogenesis and dynamics), cellular redox homeostasis, inflammation (adhesion, chemokines, interleukins, phospholipases), Abeta clearance and degradation, apoptosis, and synaptic plasticity.
Formal Description
Interaction-ID: 132667

phenotype

irregular cycling

decreases_expression of

gene/protein

genes involved in synaptic plasticity

compared to regular cyclers
Comment Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered.
Formal Description
Interaction-ID: 132668

phenotype

acyclicity

increases_expression of

gene/protein

genes involved in mitochondrial function

compared 9‚Äď10 month irregular cyclers, deficits in mitochondrial genes were increased with the transition into the acyclic condition
Comment Functional group analyses between the 9‚Äď10 month irregular cyclers and acyclic animals revealed that the deficits in glycolytic genes persisted into the acyclic condition. In contrast, mitochondrial genes were increased with the transition into acyclicity and those involved in synaptic plasticity were partially recovered.
Formal Description
Interaction-ID: 132669

phenotype

acyclicity

increases_expression of

gene/protein

genes involved in synaptic plasticity

compared 9‚Äď10 month irregular cyclers, genes involved in synaptic plasticity were partially recovered
Comment In Reg-9‚Äď10m vs Reg-6m the phospholipase PLD1 is upregulated.
Formal Description
Interaction-ID: 133264

process

menopause transition

increases_expression of

gene/protein

PLD1

Drugbank entries Show/Hide entries for PLD1
Comment In Reg-9‚Äď10m vs Reg-6m HRH1 is upregulated.
Formal Description
Interaction-ID: 133272

process

menopause transition

increases_expression of

gene/protein

HRH1

Drugbank entries Show/Hide entries for HRH1
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene BCL2L1 involved in apoptosis.
Formal Description
Interaction-ID: 133611

phenotype

acyclicity

decreases_expression of

gene/protein

BCL2L1

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for BCL2L1
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene BCL2L1 involved in apoptosis.
Formal Description
Interaction-ID: 133612

gene/protein

BCL2L1

affects_activity of

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for BCL2L1
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism.
Formal Description
Interaction-ID: 133926

process

menopause transition

decreases_expression of

gene/protein

PPARG

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for PPARG
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism.
Formal Description
Interaction-ID: 133927

gene/protein

PPARG

affects_activity of

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for PPARG
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism.
Formal Description
Interaction-ID: 133985

gene/protein

PLA2G1B

affects_activity of

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for PLA2G1B
Comment Compared to the 9‚Äď10 month acyclic group, the 16 month acyclic group exhibited lower expression of gene PPARG involved in lipid metabolism.
Formal Description
Interaction-ID: 133986

process

menopause transition

decreases_expression of

gene/protein

PLA2G1B

in the 16 month acyclic group; compared to the 9‚Äď10 month acyclic group
Drugbank entries Show/Hide entries for PLA2G1B
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB.
Formal Description
Interaction-ID: 134762

process

aging

decreases_activity of

process

Insulin/IGF1 signaling pathway

in the irregular cyclers
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB.
Formal Description
Interaction-ID: 134763

phenotype

irregular cycling

decreases_activity of

process

Insulin/IGF1 signaling pathway

in the irregular cyclers
Comment Impaired insulin/IGF1 signaling during brain aging was shown in AD animal models and patients.
Formal Description
Interaction-ID: 134764

process

aging

increases_activity of

phenotype

impaired insulin/IGF1 signaling pathway

in AD animal models and patients
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats.
Formal Description
Interaction-ID: 135324

phenotype

irregular cycling

decreases_quantity of

protein modification

MAPK3-phos

compared to regular cycling rats
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats.
Formal Description
Interaction-ID: 135325

phenotype

irregular cycling

decreases_quantity of

protein modification

MAPK1-phos

compared to regular cycling rats
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats.
Formal Description
Interaction-ID: 135326

process

aging

decreases_quantity of

protein modification

MAPK3-phos

irregular cycling rats compared to regular cycling rats
Comment The insulin/IGF1 signaling cascade from IRS1, to Akt and ERK1/2 were substantially decreased in the irregular cyclers; this pattern was accompanied by the decline in transcriptional pathways CREB and AMPK. The levels of phosphorylated (activated) ERK1 and ERK2 were decreased in irregular cycling rats compared to regular cycling rats.
Formal Description
Interaction-ID: 135327

process

aging

decreases_quantity of

protein modification

MAPK1-phos

irregular cycling rats compared to regular cycling rats